Package index • MRcare

Package Documentation

Package overview and introduction

MRcare-package MRcare: A short title line describing what the package does

Main Functions

Primary functions for MR analysis

mr_care(): CARE Mendelian Randomization Analysis

RIVW(): Robust Invalid Variance Weighted Estimator

CARE2_boot(): CARE Bootstrap Analysis

Data Processing

Functions for preprocessing GWAS data

preprocess_gwas_data(): Preprocess GWAS Summary Statistics for MRcare

Configuration

Configuration functions

configure_mrcare(): Configure MRcare Environment

get_mrcare_config(): Get MRcare Configuration

check_hf_connection(): Check Hugging Face Connection

Visualization

Functions for visualizing results

plot_care(): Plot MR-CARE Results

plot_scatter(): Plot MR Scatter Plot

plot_funnel(): Funnel Plot for MR Analysis

plot_combined(): Plot Combined MRcare Analysis Results

Utility Functions

Helper functions and methods

summary(<mrcare>): Summarize MRcare Analysis Results

print(<mrcare>): Print method for summary.mrcare objects

format_care_results(): Format CARE Analysis Results

extract_independent_variants(): Extract Independent Variants (Updated to use configuration)